Browse of TCMCG006C89473 protein

CDS

Accession Number	TCMCG006C89473
gbkey	CDS
Protein Id	XP_013681863.1
Location	complement(join(9388439..9388639,9388731..9388937,9389006..9389178,9389271..9389475,9389559..9389686,9389778..9389865,9389955..9390098,9390250..9390393,9390468..9390611,9390682..9390801,9390916..9391018,9391120..9391196,9391289..9391459,9391539..9391615,9391724..9391892,9391979..9392123,9392235..9392446,9392514..9392723,9392810..9392903,9393002..9393153,9393253..9393448,9393556..9393620,9393710..9393779,9393931..9394023,9394119..9394189,9394280..9394399,9394528..9394605,9394754..9394818,9394910..9394982,9395269..9395322))
Gene	LOC106386571
GeneID	106386571
Organism	Brassica napus

Protein

Length	1282aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013826409.2
Definition	protein PIR [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Cytoplasmic Fragile-X interacting family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K05749        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko04810        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map04810        [VIEW IN KEGG]
GOs	GO:0000902        [VIEW IN EMBL-EBI] GO:0000904        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007015        [VIEW IN EMBL-EBI] GO:0008064        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009888        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010026        [VIEW IN EMBL-EBI] GO:0010090        [VIEW IN EMBL-EBI] GO:0010638        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0030029        [VIEW IN EMBL-EBI] GO:0030036        [VIEW IN EMBL-EBI] GO:0030154        [VIEW IN EMBL-EBI] GO:0030832        [VIEW IN EMBL-EBI] GO:0030833        [VIEW IN EMBL-EBI] GO:0030838        [VIEW IN EMBL-EBI] GO:0031209        [VIEW IN EMBL-EBI] GO:0031334        [VIEW IN EMBL-EBI] GO:0032271        [VIEW IN EMBL-EBI] GO:0032273        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0032956        [VIEW IN EMBL-EBI] GO:0032970        [VIEW IN EMBL-EBI] GO:0032989        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033043        [VIEW IN EMBL-EBI] GO:0043254        [VIEW IN EMBL-EBI] GO:0044087        [VIEW IN EMBL-EBI] GO:0044089        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045010        [VIEW IN EMBL-EBI] GO:0048468        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048869        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051130        [VIEW IN EMBL-EBI] GO:0051493        [VIEW IN EMBL-EBI] GO:0051495        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0090558        [VIEW IN EMBL-EBI] GO:0090626        [VIEW IN EMBL-EBI] GO:0097435        [VIEW IN EMBL-EBI] GO:0110053        [VIEW IN EMBL-EBI] GO:1902903        [VIEW IN EMBL-EBI] GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGTTCCTGTGGAGGAAGCAATCGCAGCTCTTTCTACTTTCTCATTAGAGGATGAGCAACCAGAAGTGCAAGGACCAGCTGTGATGGTTTCAGCTGAAAGAGCTGCAACTGATAGTCCCATCGAGTATAGTGATGTTGCAGCGTACCGGTTATCTCTTTCAGAAGACACAAAAGCTCTTAACCAGCTGAACACGCTTATACAAGAAGGAAGAGAGATGGCGTCAATTCTATATACATATAGAAGCTGCGTCAAAGCATTGCCTCAGCTTCCAGAATCTATGAAGCATAGCCAGGCAGATTTGTATCTAGAAACATATCAAGTTTTGGACCTAGAAATGAGCCGTTTACGAGAAATTCAGAGATGGCAATCCTCAGCTTCAGCTAAACTAGCTGCTGACATGCAGAGGTTTTCCAGACCTGAACGGCGAATCAATGGTCCCACAGTCACACATCTGTGGTCAATGCTAAAGTTGCTTGATGTCTTGGTTCAGCTTGATCATCTTAAAAATGCTAAAGCTAGCATTCCTAATGATTTCTCTTGGTATAAAAGAACATTCACTCAAGTCAGTGCACAGTGGCAAGATACGGATACAATGAGAGAAGAGTTAGATGACTTACAGATTTTCCTGAGCACAAGATGGGCTATTTTACTCAACTTGCATGTTGAGATGTTCCGCGTGAACAATGTGGAAGACATTCTCCAAGTACTCATAGTCTTCATTGTTGAGTCGCTGGAGTTGGATTTCGCCCTTCTTTTCCCCGAGAGGTATATTCTTCTCCGAGTCTTGCCCGTTCTTGTTGTGTTAGCAACGCCATCGGAGAAAGATACCGAGGCTTTATACAAGCGGGTAAAACTCAACAGAATGATCAACATTTTCAAGAATGATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAACTGTCAGTATACTTTCAAAAGTTTTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCTCATGAGCTCCCTCCACGTGAAGCGCTAGAATATCAGAGGCATTATTTGATAGTTAACCACATTGGAGCTCTCCGTGCTGAGCACGACGATTTCACAATCCGATTTGCTTCATCCATGAATCAGTTATTGCTGTTGAAGTCAAATGATGGAGCATACACTGAATGGTGCAGAGAGGTGAAAGGAAACATGTATGATATGGTTGTTGAAGGTTTCCAGCTGCTAAGCAGATGGACTGCACGCATCTGGGAGCAATCTGCTTGGAAATTCTCTCGCCCGTGTAGGGATGCAGCTGAGACGCAAGAAGCCTCCGGATCATATTCTGATTACGAGAAGGTGGTGAGGTACAATTACACTGCAGAAGAAAGGAGAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGATCGATGCTGCAGCGCTGTGACACGTTAGTTGCAGATGCTTTATGGGAGACAATACATGCTGAGGTTCAAGATTTTGTACAAAACACGTTAGCCACGATGTTGCGTACCACCTTCCGAAAGAAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACTCTTTCAGCTGACTGGATGGCAAACACCAGGCCCGAACATGAGATGCCGTCTTCACAACACGGAGGTGATGAAAGTAAAGCGAACTTCTTCTATCCGAGGCCAGTTGCCCCAACAGCAGCACAGGTGCATTGCTTGCAGTTTTTGATATATGAGGTTGTCTCTGGTGGGAATCTGAGGAGGCCAGGAGGGTTCTTTGGAAATAATGGCTCCGAGATTCCTGTTAATGACTTAAAGCAACTTGAGACTTTCTTTTACAAGCTCAGCTTTTTTCTCCACATATTGGATTACTCAGCAAGTATTGGAATATTGACTGATCTTGGGTTCCTGTGGTTTCGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCAATTGAATGTTCACTACCATGGATGCTGATAGACCACATTCTCGAATCCCCAAATTCAGGCCTTCTTGAGAGTGTTCTGCTGCCTTTTGACATTTATAATGACTCAGCTCAACAAGCTCTGGTTGTGCTTAGGCAGAGGTTCCTCTACGATGAAATTGAGGCTGAGGTGGACCATGGTTTTGATATATTTGTATCAAGACTCTCGGAGTCTATATTCACATATTACAAGAGCTGGTCAGCAAGTGAGCTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCTGTGAGGTTTACTGCGTTGTTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATTAATTTAAGAAGTTTGATCGCTCAAAGGATGAATAAAACTTTTAGAGAGAATCTGGAGTTCCTCTTTGATCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAACTGGAGAAGCTCATAGATATCCTAAAGCATTCGCATGAACTGCTTTCACAAGATCTTACAATAGATCCTTTCAGCCTCATGCTGAATGAAATGCAAGAAAACATCTCGCTTGTCTCATTTTCCAGCCGACTTGCTACACAGATATGGTCAGAGATGCAGAGTGACTTCCTACCAAACTTCATACTTTGCAATACCACACAGAGATTTGTCCGCTCCTCGAAGGTTCCTCCTACTCAAAAACCCTCAGTGCCTTCTGCTAAGCCTAGTTTCTACTGTGGCACTCAAGACTTAAATGCAGCACATCAAAGCTTTGCACGGTTGCACAGTGGATTTTTCGGGATACCACATTTATTTTCCATAGTTAAACTTCTTGGATCCAGATCACTGCCCTGGCTTATAAGAGCGTTACTGGATCATATATCAAATAAGATAACAACACTAGAGCCAATGATATCTGGATTGCAAGAAGCATTGCCTAAGTCTATCGGATTGCTGTCTTTCGATGGTGGTGTCGCAGGCTGTATGAGGCTTATTAGAGAACAACTAAACTGGGGCACAAAGGCAGAACTCAAAACAGAAGTTCTGCGTGGAATAAAGGAAATTGGAAGTGTGATATATACAATGGGACTTCTCGACATCGTATTGAGAGAAGTAGACACAAAGCGTTTCATGCAAACAGCTCCATGGTTGGGATTAATCCCTGGCGCAGAAGGACAGATAGTTAACGCTCAAGAAGGCGAAAGCCCACTAGTCAATCTCCTAAAGTCAGCGACTTCTGCTGTTGTGTCAAGTCCCGGTTGTCTTAATCCAGCAGCGTTCTACACCATGTCAAAACAAGCAGAAGCTGCAGATCTTTTGTATAAGGCAAACATGAACGGTGGAAGCGTTCTTGAATACACACTTGCATTCACAAGCGCTTCGCTTGACAAATACTGTAGTAAATGGAGTGCTCCTCCAAAGACGGGATTCGTCGATATCACAACTTCAAAGGACTTTTACCGCATTTACGGTGGTCTTCAGATTGGATATCTGGAGGAGATAACAGTTCCACAATCAGGTCAACAAGAAGTCCTCGGAGATTCTATAGCTTGGGGTGGTTGCACTATCATTTACCTGCTCGGACAGCAACTTCACTTTGAGTTGTTTGATTTCTCGTACCAAGTACTCAATGTCTCTGAGGTTGAAACTGTATCCGCTTCACATACTCATAGGAATCCTCAAGTTCTCCAGGGATGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGGAGGCTGAACAACCATGTCTTCTCCATGCTCAAAGCTCGTTGTCCACTCGAAGACAAAACAGCTTGTGCCATTAAACAGAGCGGCGCACCGTTACCACGTGTCAGGTTTGAGAATACAGTGTCTGCCTTTGAGTCTCTGCCTCAGAAAGGAACCGTTGGCTGA

Protein:   MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTLIQEGREMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRMINIFKNDPVIPAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGALRAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQSAWKFSRPCRDAAETQEASGSYSDYEKVVRYNYTAEERRALVELVGYIKSVGSMLQRCDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEMPSSQHGGDESKANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVNDLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLIDHILESPNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSESIFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQRMNKTFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLTIDPFSLMLNEMQENISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGTQDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGLQEALPKSIGLLSFDGGVAGCMRLIREQLNWGTKAELKTEVLRGIKEIGSVIYTMGLLDIVLREVDTKRFMQTAPWLGLIPGAEGQIVNAQEGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYRIYGGLQIGYLEEITVPQSGQQEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTHRNPQVLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFENTVSAFESLPQKGTVG